SAS; refined (All Genes in which Alternative Splicing Events were located)




Topic #0: GO terms cooccurrence GO terms scores (left -- right)
GO:0005773--vacuole GO:0005829--cytosol 4 0.0494 -- 0.0307
GO:0005773--vacuole GO:0046872--metal ion binding 2 0.0494 -- 0.0304
GO:0005773--vacuole GO:0005886--plasma membrane 10 0.0494 -- 0.0300
GO:0005773--vacuole GO:0009507--chloroplast 8 0.0494 -- 0.0286
GO:0005829--cytosol GO:0046872--metal ion binding 8 0.0307 -- 0.0304
GO:0005829--cytosol GO:0005886--plasma membrane 15 0.0307 -- 0.0300
GO:0005829--cytosol GO:0009507--chloroplast 16 0.0307 -- 0.0286
GO:0046872--metal ion binding GO:0005886--plasma membrane 4 0.0304 -- 0.0300
GO:0046872--metal ion binding GO:0009507--chloroplast 10 0.0304 -- 0.0286
GO:0005886--plasma membrane GO:0009507--chloroplast 14 0.0300 -- 0.0286



Topic #1: GO terms cooccurrence GO terms scores (left -- right)
GO:0005886--plasma membrane GO:0005524--atp binding 23 0.2387 -- 0.0704
GO:0005886--plasma membrane GO:0006952--defense response 5 0.2387 -- 0.0616
GO:0005886--plasma membrane GO:0007165--signal transduction 5 0.2387 -- 0.0343
GO:0005886--plasma membrane GO:0005774--vacuolar membrane 10 0.2387 -- 0.0318
GO:0005524--atp binding GO:0006952--defense response 5 0.0704 -- 0.0616
GO:0005524--atp binding GO:0007165--signal transduction 5 0.0704 -- 0.0343
GO:0005524--atp binding GO:0005774--vacuolar membrane 3 0.0704 -- 0.0318
GO:0006952--defense response GO:0007165--signal transduction 4 0.0616 -- 0.0343
GO:0006952--defense response GO:0005774--vacuolar membrane 0 0.0616 -- 0.0318
GO:0007165--signal transduction GO:0005774--vacuolar membrane 0 0.0343 -- 0.0318



Topic #2: GO terms cooccurrence GO terms scores (left -- right)
GO:0009507--chloroplast GO:0003743--translation initiation factor activity 2 0.0309 -- 0.0301
GO:0009507--chloroplast GO:0008270--zinc ion binding 6 0.0309 -- 0.0226
GO:0009507--chloroplast GO:0005618--cell wall 7 0.0309 -- 0.0226
GO:0009507--chloroplast GO:0009416--response to light stimulus 2 0.0309 -- 0.0226
GO:0003743--translation initiation factor activity GO:0008270--zinc ion binding 0 0.0301 -- 0.0226
GO:0003743--translation initiation factor activity GO:0005618--cell wall 2 0.0301 -- 0.0226
GO:0003743--translation initiation factor activity GO:0009416--response to light stimulus 0 0.0301 -- 0.0226
GO:0008270--zinc ion binding GO:0005618--cell wall 1 0.0226 -- 0.0226
GO:0008270--zinc ion binding GO:0009416--response to light stimulus 1 0.0226 -- 0.0226
GO:0005618--cell wall GO:0009416--response to light stimulus 1 0.0226 -- 0.0226



Topic #3: GO terms cooccurrence GO terms scores (left -- right)
GO:0003729--mrna binding GO:0005829--cytosol 13 0.0790 -- 0.0720
GO:0003729--mrna binding GO:0009506--plasmodesma 6 0.0790 -- 0.0546
GO:0003729--mrna binding GO:0005886--plasma membrane 5 0.0790 -- 0.0340
GO:0003729--mrna binding GO:0006412--translation 3 0.0790 -- 0.0281
GO:0005829--cytosol GO:0009506--plasmodesma 11 0.0720 -- 0.0546
GO:0005829--cytosol GO:0005886--plasma membrane 15 0.0720 -- 0.0340
GO:0005829--cytosol GO:0006412--translation 3 0.0720 -- 0.0281
GO:0009506--plasmodesma GO:0005886--plasma membrane 14 0.0546 -- 0.0340
GO:0009506--plasmodesma GO:0006412--translation 3 0.0546 -- 0.0281
GO:0005886--plasma membrane GO:0006412--translation 3 0.0340 -- 0.0281



Topic #4: GO terms cooccurrence GO terms scores (left -- right)
GO:0003677--dna binding GO:0005524--atp binding 3 0.0280 -- 0.0200
GO:0003677--dna binding GO:0006351--transcription, dna-templated 21 0.0280 -- 0.0188
GO:0003677--dna binding GO:0006355--regulation of transcription, dna-templated 20 0.0280 -- 0.0188
GO:0003677--dna binding GO:0005829--cytosol 10 0.0280 -- 0.0124
GO:0005524--atp binding GO:0006351--transcription, dna-templated 0 0.0200 -- 0.0188
GO:0005524--atp binding GO:0006355--regulation of transcription, dna-templated 0 0.0200 -- 0.0188
GO:0005524--atp binding GO:0005829--cytosol 13 0.0200 -- 0.0124
GO:0006351--transcription, dna-templated GO:0006355--regulation of transcription, dna-templated 30 0.0188 -- 0.0188
GO:0006351--transcription, dna-templated GO:0005829--cytosol 3 0.0188 -- 0.0124
GO:0006355--regulation of transcription, dna-templated GO:0005829--cytosol 2 0.0188 -- 0.0124



Topic #5: GO terms cooccurrence GO terms scores (left -- right)
GO:0050832--defense response to fungus GO:0055085--transmembrane transport 0 0.0395 -- 0.0384
GO:0050832--defense response to fungus GO:0019538--protein metabolic process 0 0.0395 -- 0.0265
GO:0050832--defense response to fungus GO:0031969--chloroplast membrane 0 0.0395 -- 0.0135
GO:0050832--defense response to fungus GO:0042803--protein homodimerization activity 0 0.0395 -- 0.0135
GO:0055085--transmembrane transport GO:0019538--protein metabolic process 0 0.0384 -- 0.0265
GO:0055085--transmembrane transport GO:0031969--chloroplast membrane 0 0.0384 -- 0.0135
GO:0055085--transmembrane transport GO:0042803--protein homodimerization activity 0 0.0384 -- 0.0135
GO:0019538--protein metabolic process GO:0031969--chloroplast membrane 1 0.0265 -- 0.0135
GO:0019538--protein metabolic process GO:0042803--protein homodimerization activity 1 0.0265 -- 0.0135
GO:0031969--chloroplast membrane GO:0042803--protein homodimerization activity 1 0.0135 -- 0.0135



Topic #6: GO terms cooccurrence GO terms scores (left -- right)
GO:0005739--mitochondrion GO:0009507--chloroplast 29 0.0281 -- 0.0281
GO:0005739--mitochondrion GO:0046686--response to cadmium ion 7 0.0281 -- 0.0281
GO:0005739--mitochondrion GO:0005829--cytosol 6 0.0281 -- 0.0192
GO:0005739--mitochondrion GO:0031969--chloroplast membrane 2 0.0281 -- 0.0188
GO:0009507--chloroplast GO:0046686--response to cadmium ion 7 0.0281 -- 0.0281
GO:0009507--chloroplast GO:0005829--cytosol 16 0.0281 -- 0.0192
GO:0009507--chloroplast GO:0031969--chloroplast membrane 4 0.0281 -- 0.0188
GO:0046686--response to cadmium ion GO:0005829--cytosol 7 0.0281 -- 0.0192
GO:0046686--response to cadmium ion GO:0031969--chloroplast membrane 0 0.0281 -- 0.0188
GO:0005829--cytosol GO:0031969--chloroplast membrane 0 0.0192 -- 0.0188



Topic #7: GO terms cooccurrence GO terms scores (left -- right)
GO:0008270--zinc ion binding GO:0009507--chloroplast 6 0.0609 -- 0.0177
GO:0008270--zinc ion binding GO:0005730--nucleolus 3 0.0609 -- 0.0165
GO:0008270--zinc ion binding GO:0046872--metal ion binding 2 0.0609 -- 0.0156
GO:0008270--zinc ion binding GO:0009826--unidimensional cell growth 0 0.0609 -- 0.0156
GO:0009507--chloroplast GO:0005730--nucleolus 6 0.0177 -- 0.0165
GO:0009507--chloroplast GO:0046872--metal ion binding 10 0.0177 -- 0.0156
GO:0009507--chloroplast GO:0009826--unidimensional cell growth 0 0.0177 -- 0.0156
GO:0005730--nucleolus GO:0046872--metal ion binding 3 0.0165 -- 0.0156
GO:0005730--nucleolus GO:0009826--unidimensional cell growth 0 0.0165 -- 0.0156
GO:0046872--metal ion binding GO:0009826--unidimensional cell growth 0 0.0156 -- 0.0156



Topic #8: GO terms cooccurrence GO terms scores (left -- right)
GO:0005509--calcium ion binding GO:0005524--atp binding 4 0.0605 -- 0.0570
GO:0005509--calcium ion binding GO:0016310--phosphorylation 1 0.0605 -- 0.0371
GO:0005509--calcium ion binding GO:0006468--protein phosphorylation 2 0.0605 -- 0.0272
GO:0005509--calcium ion binding GO:0004672--protein kinase activity 0 0.0605 -- 0.0249
GO:0005524--atp binding GO:0016310--phosphorylation 6 0.0570 -- 0.0371
GO:0005524--atp binding GO:0006468--protein phosphorylation 15 0.0570 -- 0.0272
GO:0005524--atp binding GO:0004672--protein kinase activity 8 0.0570 -- 0.0249
GO:0016310--phosphorylation GO:0006468--protein phosphorylation 0 0.0371 -- 0.0272
GO:0016310--phosphorylation GO:0004672--protein kinase activity 0 0.0371 -- 0.0249
GO:0006468--protein phosphorylation GO:0004672--protein kinase activity 8 0.0272 -- 0.0249



Topic #9: GO terms cooccurrence GO terms scores (left -- right)
GO:0003677--dna binding GO:0005524--atp binding 3 0.0228 -- 0.0225
GO:0003677--dna binding GO:0000790--nuclear chromatin 3 0.0228 -- 0.0225
GO:0003677--dna binding GO:0005829--cytosol 10 0.0228 -- 0.0220
GO:0003677--dna binding GO:0046872--metal ion binding 6 0.0228 -- 0.0215
GO:0005524--atp binding GO:0000790--nuclear chromatin 2 0.0225 -- 0.0225
GO:0005524--atp binding GO:0005829--cytosol 13 0.0225 -- 0.0220
GO:0005524--atp binding GO:0046872--metal ion binding 8 0.0225 -- 0.0215
GO:0000790--nuclear chromatin GO:0005829--cytosol 2 0.0225 -- 0.0220
GO:0000790--nuclear chromatin GO:0046872--metal ion binding 1 0.0225 -- 0.0215
GO:0005829--cytosol GO:0046872--metal ion binding 8 0.0220 -- 0.0215



Topic #10: GO terms cooccurrence GO terms scores (left -- right)
GO:0008168--methyltransferase activity GO:0009507--chloroplast 4 0.0519 -- 0.0402
GO:0008168--methyltransferase activity GO:0006508--proteolysis 0 0.0519 -- 0.0210
GO:0008168--methyltransferase activity GO:0009658--chloroplast organization 0 0.0519 -- 0.0210
GO:0008168--methyltransferase activity GO:0010206--photosystem ii repair 0 0.0519 -- 0.0210
GO:0009507--chloroplast GO:0006508--proteolysis 5 0.0402 -- 0.0210
GO:0009507--chloroplast GO:0009658--chloroplast organization 5 0.0402 -- 0.0210
GO:0009507--chloroplast GO:0010206--photosystem ii repair 4 0.0402 -- 0.0210
GO:0006508--proteolysis GO:0009658--chloroplast organization 1 0.0210 -- 0.0210
GO:0006508--proteolysis GO:0010206--photosystem ii repair 4 0.0210 -- 0.0210
GO:0009658--chloroplast organization GO:0010206--photosystem ii repair 1 0.0210 -- 0.0210



Topic #11: GO terms cooccurrence GO terms scores (left -- right)
GO:0005886--plasma membrane GO:0005829--cytosol 15 0.0405 -- 0.0271
GO:0005886--plasma membrane GO:0009507--chloroplast 14 0.0405 -- 0.0234
GO:0005886--plasma membrane GO:0003729--mrna binding 5 0.0405 -- 0.0204
GO:0005886--plasma membrane GO:0046872--metal ion binding 4 0.0405 -- 0.0195
GO:0005829--cytosol GO:0009507--chloroplast 16 0.0271 -- 0.0234
GO:0005829--cytosol GO:0003729--mrna binding 13 0.0271 -- 0.0204
GO:0005829--cytosol GO:0046872--metal ion binding 8 0.0271 -- 0.0195
GO:0009507--chloroplast GO:0003729--mrna binding 7 0.0234 -- 0.0204
GO:0009507--chloroplast GO:0046872--metal ion binding 10 0.0234 -- 0.0195
GO:0003729--mrna binding GO:0046872--metal ion binding 1 0.0204 -- 0.0195



Topic #12: GO terms cooccurrence GO terms scores (left -- right)
GO:0016567--protein ubiquitination GO:0019005--scf ubiquitin ligase complex 3 0.0353 -- 0.0265
GO:0016567--protein ubiquitination GO:0080167--response to karrikin 0 0.0353 -- 0.0265
GO:0016567--protein ubiquitination GO:0000139--golgi membrane 0 0.0353 -- 0.0178
GO:0016567--protein ubiquitination GO:0016811--hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 0 0.0353 -- 0.0178
GO:0019005--scf ubiquitin ligase complex GO:0080167--response to karrikin 0 0.0265 -- 0.0265
GO:0019005--scf ubiquitin ligase complex GO:0000139--golgi membrane 0 0.0265 -- 0.0178
GO:0019005--scf ubiquitin ligase complex GO:0016811--hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 0 0.0265 -- 0.0178
GO:0080167--response to karrikin GO:0000139--golgi membrane 0 0.0265 -- 0.0178
GO:0080167--response to karrikin GO:0016811--hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 0 0.0265 -- 0.0178
GO:0000139--golgi membrane GO:0016811--hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 0 0.0178 -- 0.0178



Topic #13: GO terms cooccurrence GO terms scores (left -- right)
GO:0009793--embryo development ending in seed dormancy GO:0009507--chloroplast 5 0.0414 -- 0.0326
GO:0009793--embryo development ending in seed dormancy GO:0009570--chloroplast stroma 2 0.0414 -- 0.0150
GO:0009793--embryo development ending in seed dormancy GO:0005759--mitochondrial matrix 1 0.0414 -- 0.0141
GO:0009793--embryo development ending in seed dormancy GO:0000287--magnesium ion binding 0 0.0414 -- 0.0141
GO:0009507--chloroplast GO:0009570--chloroplast stroma 45 0.0326 -- 0.0150
GO:0009507--chloroplast GO:0005759--mitochondrial matrix 4 0.0326 -- 0.0141
GO:0009507--chloroplast GO:0000287--magnesium ion binding 4 0.0326 -- 0.0141
GO:0009570--chloroplast stroma GO:0005759--mitochondrial matrix 2 0.0150 -- 0.0141
GO:0009570--chloroplast stroma GO:0000287--magnesium ion binding 1 0.0150 -- 0.0141
GO:0005759--mitochondrial matrix GO:0000287--magnesium ion binding 0 0.0141 -- 0.0141



Topic #14: GO terms cooccurrence GO terms scores (left -- right)
GO:0009579--thylakoid GO:0009507--chloroplast 17 0.0631 -- 0.0501
GO:0009579--thylakoid GO:0009543--chloroplast thylakoid lumen 5 0.0631 -- 0.0491
GO:0009579--thylakoid GO:0009570--chloroplast stroma 13 0.0631 -- 0.0330
GO:0009579--thylakoid GO:0031977--thylakoid lumen 4 0.0631 -- 0.0282
GO:0009507--chloroplast GO:0009543--chloroplast thylakoid lumen 9 0.0501 -- 0.0491
GO:0009507--chloroplast GO:0009570--chloroplast stroma 45 0.0501 -- 0.0330
GO:0009507--chloroplast GO:0031977--thylakoid lumen 6 0.0501 -- 0.0282
GO:0009543--chloroplast thylakoid lumen GO:0009570--chloroplast stroma 3 0.0491 -- 0.0330
GO:0009543--chloroplast thylakoid lumen GO:0031977--thylakoid lumen 5 0.0491 -- 0.0282
GO:0009570--chloroplast stroma GO:0031977--thylakoid lumen 3 0.0330 -- 0.0282



Topic #15: GO terms cooccurrence GO terms scores (left -- right)
GO:0005739--mitochondrion GO:0005886--plasma membrane 5 0.0274 -- 0.0274
GO:0005739--mitochondrion GO:0005829--cytosol 6 0.0274 -- 0.0267
GO:0005739--mitochondrion GO:0009507--chloroplast 29 0.0274 -- 0.0234
GO:0005739--mitochondrion GO:0055114--oxidation-reduction process 8 0.0274 -- 0.0219
GO:0005886--plasma membrane GO:0005829--cytosol 15 0.0274 -- 0.0267
GO:0005886--plasma membrane GO:0009507--chloroplast 14 0.0274 -- 0.0234
GO:0005886--plasma membrane GO:0055114--oxidation-reduction process 2 0.0274 -- 0.0219
GO:0005829--cytosol GO:0009507--chloroplast 16 0.0267 -- 0.0234
GO:0005829--cytosol GO:0055114--oxidation-reduction process 6 0.0267 -- 0.0219
GO:0009507--chloroplast GO:0055114--oxidation-reduction process 17 0.0234 -- 0.0219



Topic #16: GO terms cooccurrence GO terms scores (left -- right)
GO:0005794--golgi apparatus GO:0005739--mitochondrion 1 0.0365 -- 0.0245
GO:0005794--golgi apparatus GO:0005654--nucleoplasm 0 0.0365 -- 0.0152
GO:0005794--golgi apparatus GO:0048316--seed development 0 0.0365 -- 0.0124
GO:0005794--golgi apparatus GO:0009793--embryo development ending in seed dormancy 0 0.0365 -- 0.0124
GO:0005739--mitochondrion GO:0005654--nucleoplasm 1 0.0245 -- 0.0152
GO:0005739--mitochondrion GO:0048316--seed development 0 0.0245 -- 0.0124
GO:0005739--mitochondrion GO:0009793--embryo development ending in seed dormancy 1 0.0245 -- 0.0124
GO:0005654--nucleoplasm GO:0048316--seed development 0 0.0152 -- 0.0124
GO:0005654--nucleoplasm GO:0009793--embryo development ending in seed dormancy 1 0.0152 -- 0.0124
GO:0048316--seed development GO:0009793--embryo development ending in seed dormancy 2 0.0124 -- 0.0124



Topic #17: GO terms cooccurrence GO terms scores (left -- right)
GO:0005829--cytosol GO:0005739--mitochondrion 6 0.0246 -- 0.0226
GO:0005829--cytosol GO:0055114--oxidation-reduction process 6 0.0246 -- 0.0212
GO:0005829--cytosol GO:0005524--atp binding 13 0.0246 -- 0.0159
GO:0005829--cytosol GO:0005874--microtubule 1 0.0246 -- 0.0152
GO:0005739--mitochondrion GO:0055114--oxidation-reduction process 8 0.0226 -- 0.0212
GO:0005739--mitochondrion GO:0005524--atp binding 10 0.0226 -- 0.0159
GO:0005739--mitochondrion GO:0005874--microtubule 0 0.0226 -- 0.0152
GO:0055114--oxidation-reduction process GO:0005524--atp binding 3 0.0212 -- 0.0159
GO:0055114--oxidation-reduction process GO:0005874--microtubule 1 0.0212 -- 0.0152
GO:0005524--atp binding GO:0005874--microtubule 0 0.0159 -- 0.0152



Topic #18: GO terms cooccurrence GO terms scores (left -- right)
GO:0005524--atp binding GO:0005829--cytosol 13 0.0444 -- 0.0242
GO:0005524--atp binding GO:0004386--helicase activity 4 0.0444 -- 0.0239
GO:0005524--atp binding GO:0008026--atp-dependent helicase activity 5 0.0444 -- 0.0239
GO:0005524--atp binding GO:0009506--plasmodesma 6 0.0444 -- 0.0179
GO:0005829--cytosol GO:0004386--helicase activity 2 0.0242 -- 0.0239
GO:0005829--cytosol GO:0008026--atp-dependent helicase activity 2 0.0242 -- 0.0239
GO:0005829--cytosol GO:0009506--plasmodesma 11 0.0242 -- 0.0179
GO:0004386--helicase activity GO:0008026--atp-dependent helicase activity 3 0.0239 -- 0.0239
GO:0004386--helicase activity GO:0009506--plasmodesma 2 0.0239 -- 0.0179
GO:0008026--atp-dependent helicase activity GO:0009506--plasmodesma 3 0.0239 -- 0.0179



Topic #19: GO terms cooccurrence GO terms scores (left -- right)
GO:0005829--cytosol GO:0009733--response to auxin 3 0.0269 -- 0.0202
GO:0005829--cytosol GO:0005524--atp binding 13 0.0269 -- 0.0158
GO:0005829--cytosol GO:0009751--response to salicylic acid 0 0.0269 -- 0.0135
GO:0005829--cytosol GO:0000398--mrna splicing, via spliceosome 1 0.0269 -- 0.0135
GO:0009733--response to auxin GO:0005524--atp binding 1 0.0202 -- 0.0158
GO:0009733--response to auxin GO:0009751--response to salicylic acid 3 0.0202 -- 0.0135
GO:0009733--response to auxin GO:0000398--mrna splicing, via spliceosome 0 0.0202 -- 0.0135
GO:0005524--atp binding GO:0009751--response to salicylic acid 2 0.0158 -- 0.0135
GO:0005524--atp binding GO:0000398--mrna splicing, via spliceosome 1 0.0158 -- 0.0135
GO:0009751--response to salicylic acid GO:0000398--mrna splicing, via spliceosome 0 0.0135 -- 0.0135



Topic #20: GO terms cooccurrence GO terms scores (left -- right)
GO:0009507--chloroplast GO:0009570--chloroplast stroma 45 0.2374 -- 0.1031
GO:0009507--chloroplast GO:0009941--chloroplast envelope 33 0.2374 -- 0.0944
GO:0009507--chloroplast GO:0005739--mitochondrion 29 0.2374 -- 0.0582
GO:0009507--chloroplast GO:0009535--chloroplast thylakoid membrane 21 0.2374 -- 0.0445
GO:0009570--chloroplast stroma GO:0009941--chloroplast envelope 15 0.1031 -- 0.0944
GO:0009570--chloroplast stroma GO:0005739--mitochondrion 13 0.1031 -- 0.0582
GO:0009570--chloroplast stroma GO:0009535--chloroplast thylakoid membrane 10 0.1031 -- 0.0445
GO:0009941--chloroplast envelope GO:0005739--mitochondrion 12 0.0944 -- 0.0582
GO:0009941--chloroplast envelope GO:0009535--chloroplast thylakoid membrane 14 0.0944 -- 0.0445
GO:0005739--mitochondrion GO:0009535--chloroplast thylakoid membrane 3 0.0582 -- 0.0445



Topic #21: GO terms cooccurrence GO terms scores (left -- right)
GO:0055114--oxidation-reduction process GO:0009507--chloroplast 17 0.0788 -- 0.0304
GO:0055114--oxidation-reduction process GO:0008270--zinc ion binding 7 0.0788 -- 0.0297
GO:0055114--oxidation-reduction process GO:0006511--ubiquitin-dependent protein catabolic process 0 0.0788 -- 0.0297
GO:0055114--oxidation-reduction process GO:0005777--peroxisome 3 0.0788 -- 0.0199
GO:0009507--chloroplast GO:0008270--zinc ion binding 6 0.0304 -- 0.0297
GO:0009507--chloroplast GO:0006511--ubiquitin-dependent protein catabolic process 1 0.0304 -- 0.0297
GO:0009507--chloroplast GO:0005777--peroxisome 5 0.0304 -- 0.0199
GO:0008270--zinc ion binding GO:0006511--ubiquitin-dependent protein catabolic process 0 0.0297 -- 0.0297
GO:0008270--zinc ion binding GO:0005777--peroxisome 1 0.0297 -- 0.0199
GO:0006511--ubiquitin-dependent protein catabolic process GO:0005777--peroxisome 0 0.0297 -- 0.0199



Topic #22: GO terms cooccurrence GO terms scores (left -- right)
GO:0005886--plasma membrane GO:0005516--calmodulin binding 4 0.0321 -- 0.0321
GO:0005886--plasma membrane GO:0046872--metal ion binding 4 0.0321 -- 0.0309
GO:0005886--plasma membrane GO:0005524--atp binding 23 0.0321 -- 0.0258
GO:0005886--plasma membrane GO:0004722--protein serine/threonine phosphatase activity 1 0.0321 -- 0.0194
GO:0005516--calmodulin binding GO:0046872--metal ion binding 1 0.0321 -- 0.0309
GO:0005516--calmodulin binding GO:0005524--atp binding 2 0.0321 -- 0.0258
GO:0005516--calmodulin binding GO:0004722--protein serine/threonine phosphatase activity 0 0.0321 -- 0.0194
GO:0046872--metal ion binding GO:0005524--atp binding 8 0.0309 -- 0.0258
GO:0046872--metal ion binding GO:0004722--protein serine/threonine phosphatase activity 6 0.0309 -- 0.0194
GO:0005524--atp binding GO:0004722--protein serine/threonine phosphatase activity 0 0.0258 -- 0.0194



Topic #23: GO terms cooccurrence GO terms scores (left -- right)
GO:0006355--regulation of transcription, dna-templated GO:0006351--transcription, dna-templated 30 0.1001 -- 0.0957
GO:0006355--regulation of transcription, dna-templated GO:0003677--dna binding 20 0.1001 -- 0.0803
GO:0006355--regulation of transcription, dna-templated GO:0005829--cytosol 2 0.1001 -- 0.0309
GO:0006355--regulation of transcription, dna-templated GO:0043565--sequence-specific dna binding 7 0.1001 -- 0.0286
GO:0006351--transcription, dna-templated GO:0003677--dna binding 21 0.0957 -- 0.0803
GO:0006351--transcription, dna-templated GO:0005829--cytosol 3 0.0957 -- 0.0309
GO:0006351--transcription, dna-templated GO:0043565--sequence-specific dna binding 9 0.0957 -- 0.0286
GO:0003677--dna binding GO:0005829--cytosol 10 0.0803 -- 0.0309
GO:0003677--dna binding GO:0043565--sequence-specific dna binding 3 0.0803 -- 0.0286
GO:0005829--cytosol GO:0043565--sequence-specific dna binding 0 0.0309 -- 0.0286



Topic #24: GO terms cooccurrence GO terms scores (left -- right)
GO:0005524--atp binding GO:0005886--plasma membrane 23 0.0794 -- 0.0460
GO:0005524--atp binding GO:0006468--protein phosphorylation 15 0.0794 -- 0.0450
GO:0005524--atp binding GO:0004674--protein serine/threonine kinase activity 11 0.0794 -- 0.0420
GO:0005524--atp binding GO:0004672--protein kinase activity 8 0.0794 -- 0.0267
GO:0005886--plasma membrane GO:0006468--protein phosphorylation 10 0.0460 -- 0.0450
GO:0005886--plasma membrane GO:0004674--protein serine/threonine kinase activity 7 0.0460 -- 0.0420
GO:0005886--plasma membrane GO:0004672--protein kinase activity 4 0.0460 -- 0.0267
GO:0006468--protein phosphorylation GO:0004674--protein serine/threonine kinase activity 10 0.0450 -- 0.0420
GO:0006468--protein phosphorylation GO:0004672--protein kinase activity 8 0.0450 -- 0.0267
GO:0004674--protein serine/threonine kinase activity GO:0004672--protein kinase activity 5 0.0420 -- 0.0267



Topic #25: GO terms cooccurrence GO terms scores (left -- right)
GO:0005829--cytosol GO:0009507--chloroplast 16 0.0284 -- 0.0240
GO:0005829--cytosol GO:0009908--flower development 0 0.0284 -- 0.0196
GO:0005829--cytosol GO:0046872--metal ion binding 8 0.0284 -- 0.0194
GO:0005829--cytosol GO:0005777--peroxisome 3 0.0284 -- 0.0143
GO:0009507--chloroplast GO:0009908--flower development 1 0.0240 -- 0.0196
GO:0009507--chloroplast GO:0046872--metal ion binding 10 0.0240 -- 0.0194
GO:0009507--chloroplast GO:0005777--peroxisome 5 0.0240 -- 0.0143
GO:0009908--flower development GO:0046872--metal ion binding 2 0.0196 -- 0.0194
GO:0009908--flower development GO:0005777--peroxisome 1 0.0196 -- 0.0143
GO:0046872--metal ion binding GO:0005777--peroxisome 0 0.0194 -- 0.0143



Topic #26: GO terms cooccurrence GO terms scores (left -- right)
GO:0005739--mitochondrion GO:0005783--endoplasmic reticulum 5 0.1774 -- 0.0565
GO:0005739--mitochondrion GO:0006979--response to oxidative stress 6 0.1774 -- 0.0357
GO:0005739--mitochondrion GO:0016757--transferase activity, transferring glycosyl groups 3 0.1774 -- 0.0286
GO:0005739--mitochondrion GO:0009507--chloroplast 29 0.1774 -- 0.0235
GO:0005783--endoplasmic reticulum GO:0006979--response to oxidative stress 2 0.0565 -- 0.0357
GO:0005783--endoplasmic reticulum GO:0016757--transferase activity, transferring glycosyl groups 1 0.0565 -- 0.0286
GO:0005783--endoplasmic reticulum GO:0009507--chloroplast 4 0.0565 -- 0.0235
GO:0006979--response to oxidative stress GO:0016757--transferase activity, transferring glycosyl groups 0 0.0357 -- 0.0286
GO:0006979--response to oxidative stress GO:0009507--chloroplast 6 0.0357 -- 0.0235
GO:0016757--transferase activity, transferring glycosyl groups GO:0009507--chloroplast 1 0.0286 -- 0.0235



Topic #27: GO terms cooccurrence GO terms scores (left -- right)
GO:0009507--chloroplast GO:0046983--protein dimerization activity 0 0.0387 -- 0.0275
GO:0009507--chloroplast GO:0003677--dna binding 3 0.0387 -- 0.0189
GO:0009507--chloroplast GO:0046872--metal ion binding 10 0.0387 -- 0.0184
GO:0009507--chloroplast GO:0009535--chloroplast thylakoid membrane 21 0.0387 -- 0.0184
GO:0046983--protein dimerization activity GO:0003677--dna binding 4 0.0275 -- 0.0189
GO:0046983--protein dimerization activity GO:0046872--metal ion binding 0 0.0275 -- 0.0184
GO:0046983--protein dimerization activity GO:0009535--chloroplast thylakoid membrane 0 0.0275 -- 0.0184
GO:0003677--dna binding GO:0046872--metal ion binding 6 0.0189 -- 0.0184
GO:0003677--dna binding GO:0009535--chloroplast thylakoid membrane 1 0.0189 -- 0.0184
GO:0046872--metal ion binding GO:0009535--chloroplast thylakoid membrane 4 0.0184 -- 0.0184



Topic #28: GO terms cooccurrence GO terms scores (left -- right)
GO:0005739--mitochondrion GO:0005886--plasma membrane 5 0.0300 -- 0.0238
GO:0005739--mitochondrion GO:0009507--chloroplast 29 0.0300 -- 0.0183
GO:0005739--mitochondrion GO:0005730--nucleolus 5 0.0300 -- 0.0173
GO:0005739--mitochondrion GO:0005829--cytosol 6 0.0300 -- 0.0173
GO:0005886--plasma membrane GO:0009507--chloroplast 14 0.0238 -- 0.0183
GO:0005886--plasma membrane GO:0005730--nucleolus 8 0.0238 -- 0.0173
GO:0005886--plasma membrane GO:0005829--cytosol 15 0.0238 -- 0.0173
GO:0009507--chloroplast GO:0005730--nucleolus 6 0.0183 -- 0.0173
GO:0009507--chloroplast GO:0005829--cytosol 16 0.0183 -- 0.0173
GO:0005730--nucleolus GO:0005829--cytosol 7 0.0173 -- 0.0173



Topic #29: GO terms cooccurrence GO terms scores (left -- right)
GO:0003677--dna binding GO:0005829--cytosol 10 0.0222 -- 0.0195
GO:0003677--dna binding GO:0009651--response to salt stress 3 0.0222 -- 0.0195
GO:0003677--dna binding GO:0030042--actin filament depolymerization 0 0.0222 -- 0.0195
GO:0003677--dna binding GO:0003779--actin binding 0 0.0222 -- 0.0195
GO:0005829--cytosol GO:0009651--response to salt stress 2 0.0195 -- 0.0195
GO:0005829--cytosol GO:0030042--actin filament depolymerization 0 0.0195 -- 0.0195
GO:0005829--cytosol GO:0003779--actin binding 0 0.0195 -- 0.0195
GO:0009651--response to salt stress GO:0030042--actin filament depolymerization 0 0.0195 -- 0.0195
GO:0009651--response to salt stress GO:0003779--actin binding 0 0.0195 -- 0.0195
GO:0030042--actin filament depolymerization GO:0003779--actin binding 2 0.0195 -- 0.0195