| Topic #0: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0005618--cell wall | GO:0005886--plasma membrane | 5 | 0.0814 -- 0.0679 |
| GO:0005618--cell wall | GO:0005794--golgi apparatus | 4 | 0.0814 -- 0.0544 |
| GO:0005618--cell wall | GO:0009505--plant-type cell wall | 3 | 0.0814 -- 0.0544 |
| GO:0005618--cell wall | GO:0005829--cytosol | 2 | 0.0814 -- 0.0274 |
| GO:0005886--plasma membrane | GO:0005794--golgi apparatus | 4 | 0.0679 -- 0.0544 |
| GO:0005886--plasma membrane | GO:0009505--plant-type cell wall | 6 | 0.0679 -- 0.0544 |
| GO:0005886--plasma membrane | GO:0005829--cytosol | 6 | 0.0679 -- 0.0274 |
| GO:0005794--golgi apparatus | GO:0009505--plant-type cell wall | 3 | 0.0544 -- 0.0544 |
| GO:0005794--golgi apparatus | GO:0005829--cytosol | 1 | 0.0544 -- 0.0274 |
| GO:0009505--plant-type cell wall | GO:0005829--cytosol | 1 | 0.0544 -- 0.0274 |
| Topic #1: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0005886--plasma membrane | GO:0031225--anchored component of membrane | 4 | 0.0510 -- 0.0383 |
| GO:0005886--plasma membrane | GO:0016757--transferase activity, transferring glycosyl groups | 0 | 0.0510 -- 0.0383 |
| GO:0005886--plasma membrane | GO:0042742--defense response to bacterium | 20 | 0.0510 -- 0.0257 |
| GO:0005886--plasma membrane | GO:0009651--response to salt stress | 4 | 0.0510 -- 0.0257 |
| GO:0031225--anchored component of membrane | GO:0016757--transferase activity, transferring glycosyl groups | 0 | 0.0383 -- 0.0383 |
| GO:0031225--anchored component of membrane | GO:0042742--defense response to bacterium | 0 | 0.0383 -- 0.0257 |
| GO:0031225--anchored component of membrane | GO:0009651--response to salt stress | 0 | 0.0383 -- 0.0257 |
| GO:0016757--transferase activity, transferring glycosyl groups | GO:0042742--defense response to bacterium | 0 | 0.0383 -- 0.0257 |
| GO:0016757--transferase activity, transferring glycosyl groups | GO:0009651--response to salt stress | 0 | 0.0383 -- 0.0257 |
| GO:0042742--defense response to bacterium | GO:0009651--response to salt stress | 6 | 0.0257 -- 0.0257 |
| Topic #2: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0005509--calcium ion binding | GO:0030247--polysaccharide binding | 6 | 0.0954 -- 0.0796 |
| GO:0005509--calcium ion binding | GO:0007166--cell surface receptor signaling pathway | 4 | 0.0954 -- 0.0480 |
| GO:0005509--calcium ion binding | GO:0005829--cytosol | 0 | 0.0954 -- 0.0322 |
| GO:0005509--calcium ion binding | GO:0005524--atp binding | 6 | 0.0954 -- 0.0238 |
| GO:0030247--polysaccharide binding | GO:0007166--cell surface receptor signaling pathway | 5 | 0.0796 -- 0.0480 |
| GO:0030247--polysaccharide binding | GO:0005829--cytosol | 0 | 0.0796 -- 0.0322 |
| GO:0030247--polysaccharide binding | GO:0005524--atp binding | 7 | 0.0796 -- 0.0238 |
| GO:0007166--cell surface receptor signaling pathway | GO:0005829--cytosol | 0 | 0.0480 -- 0.0322 |
| GO:0007166--cell surface receptor signaling pathway | GO:0005524--atp binding | 6 | 0.0480 -- 0.0238 |
| GO:0005829--cytosol | GO:0005524--atp binding | 2 | 0.0322 -- 0.0238 |
| Topic #3: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0009507--chloroplast | GO:0071456--cellular response to hypoxia | 0 | 0.1929 -- 0.0740 |
| GO:0009507--chloroplast | GO:0006897--endocytosis | 0 | 0.1929 -- 0.0496 |
| GO:0009507--chloroplast | GO:0005901--caveola | 0 | 0.1929 -- 0.0496 |
| GO:0009507--chloroplast | GO:0005794--golgi apparatus | 0 | 0.1929 -- 0.0252 |
| GO:0071456--cellular response to hypoxia | GO:0006897--endocytosis | 1 | 0.0740 -- 0.0496 |
| GO:0071456--cellular response to hypoxia | GO:0005901--caveola | 1 | 0.0740 -- 0.0496 |
| GO:0071456--cellular response to hypoxia | GO:0005794--golgi apparatus | 0 | 0.0740 -- 0.0252 |
| GO:0006897--endocytosis | GO:0005901--caveola | 1 | 0.0496 -- 0.0496 |
| GO:0006897--endocytosis | GO:0005794--golgi apparatus | 1 | 0.0496 -- 0.0252 |
| GO:0005901--caveola | GO:0005794--golgi apparatus | 0 | 0.0496 -- 0.0252 |
| Topic #4: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0043531--adp binding | GO:0005524--atp binding | 3 | 0.1458 -- 0.0733 |
| GO:0043531--adp binding | GO:0006952--defense response | 7 | 0.1458 -- 0.0550 |
| GO:0043531--adp binding | GO:0009507--chloroplast | 0 | 0.1458 -- 0.0491 |
| GO:0043531--adp binding | GO:0005788--endoplasmic reticulum lumen | 0 | 0.1458 -- 0.0250 |
| GO:0005524--atp binding | GO:0006952--defense response | 6 | 0.0733 -- 0.0550 |
| GO:0005524--atp binding | GO:0009507--chloroplast | 6 | 0.0733 -- 0.0491 |
| GO:0005524--atp binding | GO:0005788--endoplasmic reticulum lumen | 1 | 0.0733 -- 0.0250 |
| GO:0006952--defense response | GO:0009507--chloroplast | 3 | 0.0550 -- 0.0491 |
| GO:0006952--defense response | GO:0005788--endoplasmic reticulum lumen | 0 | 0.0550 -- 0.0250 |
| GO:0009507--chloroplast | GO:0005788--endoplasmic reticulum lumen | 2 | 0.0491 -- 0.0250 |
| Topic #5: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0006952--defense response | GO:0007165--signal transduction | 17 | 0.4048 -- 0.2725 |
| GO:0006952--defense response | GO:0005886--plasma membrane | 10 | 0.4048 -- 0.0654 |
| GO:0006952--defense response | GO:0055046--microgametogenesis | 0 | 0.4048 -- 0.0156 |
| GO:0006952--defense response | GO:0043531--adp binding | 7 | 0.4048 -- 0.0005 |
| GO:0007165--signal transduction | GO:0005886--plasma membrane | 5 | 0.2725 -- 0.0654 |
| GO:0007165--signal transduction | GO:0055046--microgametogenesis | 0 | 0.2725 -- 0.0156 |
| GO:0007165--signal transduction | GO:0043531--adp binding | 5 | 0.2725 -- 0.0005 |
| GO:0005886--plasma membrane | GO:0055046--microgametogenesis | 0 | 0.0654 -- 0.0156 |
| GO:0005886--plasma membrane | GO:0043531--adp binding | 1 | 0.0654 -- 0.0005 |
| GO:0055046--microgametogenesis | GO:0043531--adp binding | 0 | 0.0156 -- 0.0005 |
| Topic #6: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0006355--regulation of transcription, dna-templated | GO:0006351--transcription, dna-templated | 16 | 0.1504 -- 0.1409 |
| GO:0006355--regulation of transcription, dna-templated | GO:0003677--dna binding | 12 | 0.1504 -- 0.1134 |
| GO:0006355--regulation of transcription, dna-templated | GO:0043565--sequence-specific dna binding | 7 | 0.1504 -- 0.0568 |
| GO:0006355--regulation of transcription, dna-templated | GO:0044212--transcription regulatory region dna binding | 5 | 0.1504 -- 0.0474 |
| GO:0006351--transcription, dna-templated | GO:0003677--dna binding | 11 | 0.1409 -- 0.1134 |
| GO:0006351--transcription, dna-templated | GO:0043565--sequence-specific dna binding | 7 | 0.1409 -- 0.0568 |
| GO:0006351--transcription, dna-templated | GO:0044212--transcription regulatory region dna binding | 5 | 0.1409 -- 0.0474 |
| GO:0003677--dna binding | GO:0043565--sequence-specific dna binding | 4 | 0.1134 -- 0.0568 |
| GO:0003677--dna binding | GO:0044212--transcription regulatory region dna binding | 3 | 0.1134 -- 0.0474 |
| GO:0043565--sequence-specific dna binding | GO:0044212--transcription regulatory region dna binding | 3 | 0.0568 -- 0.0474 |
| Topic #7: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0007275--multicellular organism development | GO:0004842--ubiquitin-protein transferase activity | 0 | 0.1254 -- 0.0257 |
| GO:0007275--multicellular organism development | GO:0016567--protein ubiquitination | 0 | 0.1254 -- 0.0257 |
| GO:0007275--multicellular organism development | GO:0010224--response to uv-b | 0 | 0.1254 -- 0.0257 |
| GO:0007275--multicellular organism development | GO:0046872--metal ion binding | 0 | 0.1254 -- 0.0257 |
| GO:0004842--ubiquitin-protein transferase activity | GO:0016567--protein ubiquitination | 4 | 0.0257 -- 0.0257 |
| GO:0004842--ubiquitin-protein transferase activity | GO:0010224--response to uv-b | 1 | 0.0257 -- 0.0257 |
| GO:0004842--ubiquitin-protein transferase activity | GO:0046872--metal ion binding | 1 | 0.0257 -- 0.0257 |
| GO:0016567--protein ubiquitination | GO:0010224--response to uv-b | 1 | 0.0257 -- 0.0257 |
| GO:0016567--protein ubiquitination | GO:0046872--metal ion binding | 1 | 0.0257 -- 0.0257 |
| GO:0010224--response to uv-b | GO:0046872--metal ion binding | 1 | 0.0257 -- 0.0257 |
| Topic #8: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0009617--response to bacterium | GO:0009737--response to abscisic acid | 2 | 0.0651 -- 0.0328 |
| GO:0009617--response to bacterium | GO:0042742--defense response to bacterium | 4 | 0.0651 -- 0.0328 |
| GO:0009617--response to bacterium | GO:0009651--response to salt stress | 1 | 0.0651 -- 0.0328 |
| GO:0009617--response to bacterium | GO:0009723--response to ethylene | 1 | 0.0651 -- 0.0328 |
| GO:0009737--response to abscisic acid | GO:0042742--defense response to bacterium | 4 | 0.0328 -- 0.0328 |
| GO:0009737--response to abscisic acid | GO:0009651--response to salt stress | 2 | 0.0328 -- 0.0328 |
| GO:0009737--response to abscisic acid | GO:0009723--response to ethylene | 2 | 0.0328 -- 0.0328 |
| GO:0042742--defense response to bacterium | GO:0009651--response to salt stress | 6 | 0.0328 -- 0.0328 |
| GO:0042742--defense response to bacterium | GO:0009723--response to ethylene | 2 | 0.0328 -- 0.0328 |
| GO:0009651--response to salt stress | GO:0009723--response to ethylene | 3 | 0.0328 -- 0.0328 |
| Topic #9: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0009506--plasmodesma | GO:0005886--plasma membrane | 11 | 0.1582 -- 0.1302 |
| GO:0009506--plasmodesma | GO:0005774--vacuolar membrane | 5 | 0.1582 -- 0.0925 |
| GO:0009506--plasmodesma | GO:0005773--vacuole | 6 | 0.1582 -- 0.0787 |
| GO:0009506--plasmodesma | GO:0005524--atp binding | 4 | 0.1582 -- 0.0677 |
| GO:0005886--plasma membrane | GO:0005774--vacuolar membrane | 7 | 0.1302 -- 0.0925 |
| GO:0005886--plasma membrane | GO:0005773--vacuole | 8 | 0.1302 -- 0.0787 |
| GO:0005886--plasma membrane | GO:0005524--atp binding | 45 | 0.1302 -- 0.0677 |
| GO:0005774--vacuolar membrane | GO:0005773--vacuole | 3 | 0.0925 -- 0.0787 |
| GO:0005774--vacuolar membrane | GO:0005524--atp binding | 4 | 0.0925 -- 0.0677 |
| GO:0005773--vacuole | GO:0005524--atp binding | 4 | 0.0787 -- 0.0677 |
| Topic #10: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0009733--response to auxin | GO:0043565--sequence-specific dna binding | 3 | 0.1585 -- 0.0017 |
| GO:0009733--response to auxin | GO:0003677--dna binding | 3 | 0.1585 -- 0.0017 |
| GO:0009733--response to auxin | GO:0006351--transcription, dna-templated | 3 | 0.1585 -- 0.0017 |
| GO:0009733--response to auxin | GO:0006355--regulation of transcription, dna-templated | 3 | 0.1585 -- 0.0017 |
| GO:0043565--sequence-specific dna binding | GO:0003677--dna binding | 4 | 0.0017 -- 0.0017 |
| GO:0043565--sequence-specific dna binding | GO:0006351--transcription, dna-templated | 7 | 0.0017 -- 0.0017 |
| GO:0043565--sequence-specific dna binding | GO:0006355--regulation of transcription, dna-templated | 7 | 0.0017 -- 0.0017 |
| GO:0003677--dna binding | GO:0006351--transcription, dna-templated | 11 | 0.0017 -- 0.0017 |
| GO:0003677--dna binding | GO:0006355--regulation of transcription, dna-templated | 12 | 0.0017 -- 0.0017 |
| GO:0006351--transcription, dna-templated | GO:0006355--regulation of transcription, dna-templated | 16 | 0.0017 -- 0.0017 |
| Topic #11: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0005794--golgi apparatus | GO:0046658--anchored component of plasma membrane | 1 | 0.0414 -- 0.0414 |
| GO:0005794--golgi apparatus | GO:0005739--mitochondrion | 1 | 0.0414 -- 0.0414 |
| GO:0005794--golgi apparatus | GO:0005975--carbohydrate metabolic process | 0 | 0.0414 -- 0.0210 |
| GO:0005794--golgi apparatus | GO:0051707--response to other organism | 0 | 0.0414 -- 0.0210 |
| GO:0046658--anchored component of plasma membrane | GO:0005739--mitochondrion | 1 | 0.0414 -- 0.0414 |
| GO:0046658--anchored component of plasma membrane | GO:0005975--carbohydrate metabolic process | 0 | 0.0414 -- 0.0210 |
| GO:0046658--anchored component of plasma membrane | GO:0051707--response to other organism | 0 | 0.0414 -- 0.0210 |
| GO:0005739--mitochondrion | GO:0005975--carbohydrate metabolic process | 0 | 0.0414 -- 0.0210 |
| GO:0005739--mitochondrion | GO:0051707--response to other organism | 0 | 0.0414 -- 0.0210 |
| GO:0005975--carbohydrate metabolic process | GO:0051707--response to other organism | 1 | 0.0210 -- 0.0210 |
| Topic #12: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0016709--oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, nad(p)h as one donor, and incorporation of one atom of oxygen | GO:0020037--heme binding | 8 | 0.0632 -- 0.0632 |
| GO:0016709--oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, nad(p)h as one donor, and incorporation of one atom of oxygen | GO:0005506--iron ion binding | 8 | 0.0632 -- 0.0626 |
| GO:0016709--oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, nad(p)h as one donor, and incorporation of one atom of oxygen | GO:0055114--oxidation-reduction process | 8 | 0.0632 -- 0.0624 |
| GO:0016709--oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, nad(p)h as one donor, and incorporation of one atom of oxygen | GO:0044550--secondary metabolite biosynthetic process | 7 | 0.0632 -- 0.0492 |
| GO:0020037--heme binding | GO:0005506--iron ion binding | 9 | 0.0632 -- 0.0626 |
| GO:0020037--heme binding | GO:0055114--oxidation-reduction process | 9 | 0.0632 -- 0.0624 |
| GO:0020037--heme binding | GO:0044550--secondary metabolite biosynthetic process | 6 | 0.0632 -- 0.0492 |
| GO:0005506--iron ion binding | GO:0055114--oxidation-reduction process | 10 | 0.0626 -- 0.0624 |
| GO:0005506--iron ion binding | GO:0044550--secondary metabolite biosynthetic process | 6 | 0.0626 -- 0.0492 |
| GO:0055114--oxidation-reduction process | GO:0044550--secondary metabolite biosynthetic process | 6 | 0.0624 -- 0.0492 |
| Topic #13: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0005886--plasma membrane | GO:0009507--chloroplast | 6 | 0.0251 -- 0.0251 |
| GO:0005886--plasma membrane | GO:0042742--defense response to bacterium | 20 | 0.0251 -- 0.0251 |
| GO:0005886--plasma membrane | GO:0009737--response to abscisic acid | 6 | 0.0251 -- 0.0251 |
| GO:0005886--plasma membrane | GO:0009627--systemic acquired resistance | 2 | 0.0251 -- 0.0251 |
| GO:0009507--chloroplast | GO:0042742--defense response to bacterium | 6 | 0.0251 -- 0.0251 |
| GO:0009507--chloroplast | GO:0009737--response to abscisic acid | 1 | 0.0251 -- 0.0251 |
| GO:0009507--chloroplast | GO:0009627--systemic acquired resistance | 2 | 0.0251 -- 0.0251 |
| GO:0042742--defense response to bacterium | GO:0009737--response to abscisic acid | 4 | 0.0251 -- 0.0251 |
| GO:0042742--defense response to bacterium | GO:0009627--systemic acquired resistance | 3 | 0.0251 -- 0.0251 |
| GO:0009737--response to abscisic acid | GO:0009627--systemic acquired resistance | 2 | 0.0251 -- 0.0251 |
| Topic #14: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0005507--copper ion binding | GO:0005886--plasma membrane | 0 | 0.0790 -- 0.0757 |
| GO:0005507--copper ion binding | GO:0005524--atp binding | 0 | 0.0790 -- 0.0613 |
| GO:0005507--copper ion binding | GO:0055114--oxidation-reduction process | 2 | 0.0790 -- 0.0398 |
| GO:0005507--copper ion binding | GO:0016887--atpase activity | 0 | 0.0790 -- 0.0398 |
| GO:0005886--plasma membrane | GO:0005524--atp binding | 45 | 0.0757 -- 0.0613 |
| GO:0005886--plasma membrane | GO:0055114--oxidation-reduction process | 3 | 0.0757 -- 0.0398 |
| GO:0005886--plasma membrane | GO:0016887--atpase activity | 3 | 0.0757 -- 0.0398 |
| GO:0005524--atp binding | GO:0055114--oxidation-reduction process | 0 | 0.0613 -- 0.0398 |
| GO:0005524--atp binding | GO:0016887--atpase activity | 3 | 0.0613 -- 0.0398 |
| GO:0055114--oxidation-reduction process | GO:0016887--atpase activity | 0 | 0.0398 -- 0.0398 |
| Topic #15: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0009416--response to light stimulus | GO:0004970--ionotropic glutamate receptor activity | 2 | 0.0723 -- 0.0723 |
| GO:0009416--response to light stimulus | GO:0005217--intracellular ligand-gated ion channel activity | 2 | 0.0723 -- 0.0723 |
| GO:0009416--response to light stimulus | GO:0006874--cellular calcium ion homeostasis | 2 | 0.0723 -- 0.0723 |
| GO:0009416--response to light stimulus | GO:0030003--cellular cation homeostasis | 1 | 0.0723 -- 0.0367 |
| GO:0004970--ionotropic glutamate receptor activity | GO:0005217--intracellular ligand-gated ion channel activity | 2 | 0.0723 -- 0.0723 |
| GO:0004970--ionotropic glutamate receptor activity | GO:0006874--cellular calcium ion homeostasis | 2 | 0.0723 -- 0.0723 |
| GO:0004970--ionotropic glutamate receptor activity | GO:0030003--cellular cation homeostasis | 1 | 0.0723 -- 0.0367 |
| GO:0005217--intracellular ligand-gated ion channel activity | GO:0006874--cellular calcium ion homeostasis | 2 | 0.0723 -- 0.0723 |
| GO:0005217--intracellular ligand-gated ion channel activity | GO:0030003--cellular cation homeostasis | 1 | 0.0723 -- 0.0367 |
| GO:0006874--cellular calcium ion homeostasis | GO:0030003--cellular cation homeostasis | 1 | 0.0723 -- 0.0367 |
| Topic #16: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0006979--response to oxidative stress | GO:0005886--plasma membrane | 2 | 0.1257 -- 0.0843 |
| GO:0006979--response to oxidative stress | GO:0003779--actin binding | 0 | 0.1257 -- 0.0428 |
| GO:0006979--response to oxidative stress | GO:0030041--actin filament polymerization | 0 | 0.1257 -- 0.0428 |
| GO:0006979--response to oxidative stress | GO:0015031--protein transport | 1 | 0.1257 -- 0.0428 |
| GO:0005886--plasma membrane | GO:0003779--actin binding | 1 | 0.0843 -- 0.0428 |
| GO:0005886--plasma membrane | GO:0030041--actin filament polymerization | 1 | 0.0843 -- 0.0428 |
| GO:0005886--plasma membrane | GO:0015031--protein transport | 0 | 0.0843 -- 0.0428 |
| GO:0003779--actin binding | GO:0030041--actin filament polymerization | 2 | 0.0428 -- 0.0428 |
| GO:0003779--actin binding | GO:0015031--protein transport | 0 | 0.0428 -- 0.0428 |
| GO:0030041--actin filament polymerization | GO:0015031--protein transport | 0 | 0.0428 -- 0.0428 |
| Topic #17: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0006886--intracellular protein transport | GO:0005794--golgi apparatus | 1 | 0.0471 -- 0.0240 |
| GO:0006886--intracellular protein transport | GO:0005509--calcium ion binding | 1 | 0.0471 -- 0.0240 |
| GO:0006886--intracellular protein transport | GO:0045892--negative regulation of transcription, dna-templated | 0 | 0.0471 -- 0.0240 |
| GO:0006886--intracellular protein transport | GO:0015031--protein transport | 1 | 0.0471 -- 0.0240 |
| GO:0005794--golgi apparatus | GO:0005509--calcium ion binding | 2 | 0.0240 -- 0.0240 |
| GO:0005794--golgi apparatus | GO:0045892--negative regulation of transcription, dna-templated | 0 | 0.0240 -- 0.0240 |
| GO:0005794--golgi apparatus | GO:0015031--protein transport | 2 | 0.0240 -- 0.0240 |
| GO:0005509--calcium ion binding | GO:0045892--negative regulation of transcription, dna-templated | 0 | 0.0240 -- 0.0240 |
| GO:0005509--calcium ion binding | GO:0015031--protein transport | 2 | 0.0240 -- 0.0240 |
| GO:0045892--negative regulation of transcription, dna-templated | GO:0015031--protein transport | 0 | 0.0240 -- 0.0240 |
| Topic #18: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0006508--proteolysis | GO:0004252--serine-type endopeptidase activity | 2 | 0.0672 -- 0.0229 |
| GO:0006508--proteolysis | GO:0012501--programmed cell death | 1 | 0.0672 -- 0.0229 |
| GO:0006508--proteolysis | GO:0005768--endosome | 1 | 0.0672 -- 0.0229 |
| GO:0006508--proteolysis | GO:0005618--cell wall | 1 | 0.0672 -- 0.0229 |
| GO:0004252--serine-type endopeptidase activity | GO:0012501--programmed cell death | 0 | 0.0229 -- 0.0229 |
| GO:0004252--serine-type endopeptidase activity | GO:0005768--endosome | 1 | 0.0229 -- 0.0229 |
| GO:0004252--serine-type endopeptidase activity | GO:0005618--cell wall | 1 | 0.0229 -- 0.0229 |
| GO:0012501--programmed cell death | GO:0005768--endosome | 0 | 0.0229 -- 0.0229 |
| GO:0012501--programmed cell death | GO:0005618--cell wall | 0 | 0.0229 -- 0.0229 |
| GO:0005768--endosome | GO:0005618--cell wall | 1 | 0.0229 -- 0.0229 |
| Topic #19: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0042742--defense response to bacterium | GO:0055114--oxidation-reduction process | 4 | 0.0383 -- 0.0194 |
| GO:0042742--defense response to bacterium | GO:0005829--cytosol | 3 | 0.0383 -- 0.0194 |
| GO:0042742--defense response to bacterium | GO:0005773--vacuole | 3 | 0.0383 -- 0.0194 |
| GO:0042742--defense response to bacterium | GO:0005618--cell wall | 1 | 0.0383 -- 0.0194 |
| GO:0055114--oxidation-reduction process | GO:0005829--cytosol | 4 | 0.0194 -- 0.0194 |
| GO:0055114--oxidation-reduction process | GO:0005773--vacuole | 1 | 0.0194 -- 0.0194 |
| GO:0055114--oxidation-reduction process | GO:0005618--cell wall | 0 | 0.0194 -- 0.0194 |
| GO:0005829--cytosol | GO:0005773--vacuole | 2 | 0.0194 -- 0.0194 |
| GO:0005829--cytosol | GO:0005618--cell wall | 2 | 0.0194 -- 0.0194 |
| GO:0005773--vacuole | GO:0005618--cell wall | 1 | 0.0194 -- 0.0194 |
| Topic #20: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0010468--regulation of gene expression | GO:0008270--zinc ion binding | 0 | 0.0520 -- 0.0264 |
| GO:0010468--regulation of gene expression | GO:0004842--ubiquitin-protein transferase activity | 0 | 0.0520 -- 0.0264 |
| GO:0010468--regulation of gene expression | GO:0002237--response to molecule of bacterial origin | 0 | 0.0520 -- 0.0264 |
| GO:0010468--regulation of gene expression | GO:0005829--cytosol | 1 | 0.0520 -- 0.0264 |
| GO:0008270--zinc ion binding | GO:0004842--ubiquitin-protein transferase activity | 3 | 0.0264 -- 0.0264 |
| GO:0008270--zinc ion binding | GO:0002237--response to molecule of bacterial origin | 0 | 0.0264 -- 0.0264 |
| GO:0008270--zinc ion binding | GO:0005829--cytosol | 0 | 0.0264 -- 0.0264 |
| GO:0004842--ubiquitin-protein transferase activity | GO:0002237--response to molecule of bacterial origin | 0 | 0.0264 -- 0.0264 |
| GO:0004842--ubiquitin-protein transferase activity | GO:0005829--cytosol | 0 | 0.0264 -- 0.0264 |
| GO:0002237--response to molecule of bacterial origin | GO:0005829--cytosol | 0 | 0.0264 -- 0.0264 |
| Topic #21: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0005516--calmodulin binding | GO:0005887--integral component of plasma membrane | 2 | 0.0311 -- 0.0311 |
| GO:0005516--calmodulin binding | GO:0030553--cgmp binding | 2 | 0.0311 -- 0.0311 |
| GO:0005516--calmodulin binding | GO:0030552--camp binding | 2 | 0.0311 -- 0.0311 |
| GO:0005516--calmodulin binding | GO:0005249--voltage-gated potassium channel activity | 2 | 0.0311 -- 0.0311 |
| GO:0005887--integral component of plasma membrane | GO:0030553--cgmp binding | 2 | 0.0311 -- 0.0311 |
| GO:0005887--integral component of plasma membrane | GO:0030552--camp binding | 2 | 0.0311 -- 0.0311 |
| GO:0005887--integral component of plasma membrane | GO:0005249--voltage-gated potassium channel activity | 2 | 0.0311 -- 0.0311 |
| GO:0030553--cgmp binding | GO:0030552--camp binding | 2 | 0.0311 -- 0.0311 |
| GO:0030553--cgmp binding | GO:0005249--voltage-gated potassium channel activity | 2 | 0.0311 -- 0.0311 |
| GO:0030552--camp binding | GO:0005249--voltage-gated potassium channel activity | 2 | 0.0311 -- 0.0311 |
| Topic #22: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0005886--plasma membrane | GO:0009751--response to salicylic acid | 6 | 0.0383 -- 0.0257 |
| GO:0005886--plasma membrane | GO:1902290--positive regulation of defense response to oomycetes | 1 | 0.0383 -- 0.0257 |
| GO:0005886--plasma membrane | GO:1900426--positive regulation of defense response to bacterium | 0 | 0.0383 -- 0.0257 |
| GO:0005886--plasma membrane | GO:0006508--proteolysis | 2 | 0.0383 -- 0.0257 |
| GO:0009751--response to salicylic acid | GO:1902290--positive regulation of defense response to oomycetes | 1 | 0.0257 -- 0.0257 |
| GO:0009751--response to salicylic acid | GO:1900426--positive regulation of defense response to bacterium | 1 | 0.0257 -- 0.0257 |
| GO:0009751--response to salicylic acid | GO:0006508--proteolysis | 0 | 0.0257 -- 0.0257 |
| GO:1902290--positive regulation of defense response to oomycetes | GO:1900426--positive regulation of defense response to bacterium | 2 | 0.0257 -- 0.0257 |
| GO:1902290--positive regulation of defense response to oomycetes | GO:0006508--proteolysis | 0 | 0.0257 -- 0.0257 |
| GO:1900426--positive regulation of defense response to bacterium | GO:0006508--proteolysis | 0 | 0.0257 -- 0.0257 |
| Topic #23: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0046872--metal ion binding | GO:0005829--cytosol | 4 | 0.1633 -- 0.0819 |
| GO:0046872--metal ion binding | GO:0055114--oxidation-reduction process | 4 | 0.1633 -- 0.0494 |
| GO:0046872--metal ion binding | GO:0004722--protein serine/threonine phosphatase activity | 3 | 0.1633 -- 0.0494 |
| GO:0046872--metal ion binding | GO:0006979--response to oxidative stress | 4 | 0.1633 -- 0.0494 |
| GO:0005829--cytosol | GO:0055114--oxidation-reduction process | 4 | 0.0819 -- 0.0494 |
| GO:0005829--cytosol | GO:0004722--protein serine/threonine phosphatase activity | 0 | 0.0819 -- 0.0494 |
| GO:0005829--cytosol | GO:0006979--response to oxidative stress | 4 | 0.0819 -- 0.0494 |
| GO:0055114--oxidation-reduction process | GO:0004722--protein serine/threonine phosphatase activity | 0 | 0.0494 -- 0.0494 |
| GO:0055114--oxidation-reduction process | GO:0006979--response to oxidative stress | 2 | 0.0494 -- 0.0494 |
| GO:0004722--protein serine/threonine phosphatase activity | GO:0006979--response to oxidative stress | 0 | 0.0494 -- 0.0494 |
| Topic #24: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0009737--response to abscisic acid | GO:0009414--response to water deprivation | 1 | 0.0343 -- 0.0343 |
| GO:0009737--response to abscisic acid | GO:0042742--defense response to bacterium | 4 | 0.0343 -- 0.0234 |
| GO:0009737--response to abscisic acid | GO:0010200--response to chitin | 1 | 0.0343 -- 0.0174 |
| GO:0009737--response to abscisic acid | GO:0006629--lipid metabolic process | 2 | 0.0343 -- 0.0174 |
| GO:0009414--response to water deprivation | GO:0042742--defense response to bacterium | 4 | 0.0343 -- 0.0234 |
| GO:0009414--response to water deprivation | GO:0010200--response to chitin | 1 | 0.0343 -- 0.0174 |
| GO:0009414--response to water deprivation | GO:0006629--lipid metabolic process | 0 | 0.0343 -- 0.0174 |
| GO:0042742--defense response to bacterium | GO:0010200--response to chitin | 1 | 0.0234 -- 0.0174 |
| GO:0042742--defense response to bacterium | GO:0006629--lipid metabolic process | 1 | 0.0234 -- 0.0174 |
| GO:0010200--response to chitin | GO:0006629--lipid metabolic process | 0 | 0.0174 -- 0.0174 |
| Topic #25: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0005739--mitochondrion | GO:0046983--protein dimerization activity | 0 | 0.3655 -- 0.0494 |
| GO:0005739--mitochondrion | GO:0042631--cellular response to water deprivation | 0 | 0.3655 -- 0.0251 |
| GO:0005739--mitochondrion | GO:0071215--cellular response to abscisic acid stimulus | 0 | 0.3655 -- 0.0251 |
| GO:0005739--mitochondrion | GO:0048573--photoperiodism, flowering | 0 | 0.3655 -- 0.0251 |
| GO:0046983--protein dimerization activity | GO:0042631--cellular response to water deprivation | 1 | 0.0494 -- 0.0251 |
| GO:0046983--protein dimerization activity | GO:0071215--cellular response to abscisic acid stimulus | 1 | 0.0494 -- 0.0251 |
| GO:0046983--protein dimerization activity | GO:0048573--photoperiodism, flowering | 1 | 0.0494 -- 0.0251 |
| GO:0042631--cellular response to water deprivation | GO:0071215--cellular response to abscisic acid stimulus | 1 | 0.0251 -- 0.0251 |
| GO:0042631--cellular response to water deprivation | GO:0048573--photoperiodism, flowering | 1 | 0.0251 -- 0.0251 |
| GO:0071215--cellular response to abscisic acid stimulus | GO:0048573--photoperiodism, flowering | 1 | 0.0251 -- 0.0251 |
| Topic #26: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0006468--protein phosphorylation | GO:0005524--atp binding | 39 | 0.1637 -- 0.1550 |
| GO:0006468--protein phosphorylation | GO:0005886--plasma membrane | 36 | 0.1637 -- 0.1484 |
| GO:0006468--protein phosphorylation | GO:0004674--protein serine/threonine kinase activity | 35 | 0.1637 -- 0.1467 |
| GO:0006468--protein phosphorylation | GO:0004672--protein kinase activity | 23 | 0.1637 -- 0.0965 |
| GO:0005524--atp binding | GO:0005886--plasma membrane | 45 | 0.1550 -- 0.1484 |
| GO:0005524--atp binding | GO:0004674--protein serine/threonine kinase activity | 34 | 0.1550 -- 0.1467 |
| GO:0005524--atp binding | GO:0004672--protein kinase activity | 23 | 0.1550 -- 0.0965 |
| GO:0005886--plasma membrane | GO:0004674--protein serine/threonine kinase activity | 35 | 0.1484 -- 0.1467 |
| GO:0005886--plasma membrane | GO:0004672--protein kinase activity | 22 | 0.1484 -- 0.0965 |
| GO:0004674--protein serine/threonine kinase activity | GO:0004672--protein kinase activity | 21 | 0.1467 -- 0.0965 |
| Topic #27: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0050832--defense response to fungus | GO:0005509--calcium ion binding | 1 | 0.1121 -- 0.0382 |
| GO:0050832--defense response to fungus | GO:0009505--plant-type cell wall | 1 | 0.1121 -- 0.0382 |
| GO:0050832--defense response to fungus | GO:0007166--cell surface receptor signaling pathway | 1 | 0.1121 -- 0.0382 |
| GO:0050832--defense response to fungus | GO:0009615--response to virus | 1 | 0.1121 -- 0.0382 |
| GO:0005509--calcium ion binding | GO:0009505--plant-type cell wall | 2 | 0.0382 -- 0.0382 |
| GO:0005509--calcium ion binding | GO:0007166--cell surface receptor signaling pathway | 4 | 0.0382 -- 0.0382 |
| GO:0005509--calcium ion binding | GO:0009615--response to virus | 1 | 0.0382 -- 0.0382 |
| GO:0009505--plant-type cell wall | GO:0007166--cell surface receptor signaling pathway | 2 | 0.0382 -- 0.0382 |
| GO:0009505--plant-type cell wall | GO:0009615--response to virus | 1 | 0.0382 -- 0.0382 |
| GO:0007166--cell surface receptor signaling pathway | GO:0009615--response to virus | 1 | 0.0382 -- 0.0382 |
| Topic #28: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0005886--plasma membrane | GO:0005524--atp binding | 45 | 0.1796 -- 0.1278 |
| GO:0005886--plasma membrane | GO:0004674--protein serine/threonine kinase activity | 35 | 0.1796 -- 0.1093 |
| GO:0005886--plasma membrane | GO:0006468--protein phosphorylation | 36 | 0.1796 -- 0.1088 |
| GO:0005886--plasma membrane | GO:0004672--protein kinase activity | 22 | 0.1796 -- 0.0685 |
| GO:0005524--atp binding | GO:0004674--protein serine/threonine kinase activity | 34 | 0.1278 -- 0.1093 |
| GO:0005524--atp binding | GO:0006468--protein phosphorylation | 39 | 0.1278 -- 0.1088 |
| GO:0005524--atp binding | GO:0004672--protein kinase activity | 23 | 0.1278 -- 0.0685 |
| GO:0004674--protein serine/threonine kinase activity | GO:0006468--protein phosphorylation | 35 | 0.1093 -- 0.1088 |
| GO:0004674--protein serine/threonine kinase activity | GO:0004672--protein kinase activity | 21 | 0.1093 -- 0.0685 |
| GO:0006468--protein phosphorylation | GO:0004672--protein kinase activity | 23 | 0.1088 -- 0.0685 |
| Topic #29: | GO terms cooccurrence | GO terms scores (left -- right) | |
|---|---|---|---|
| GO:0012501--programmed cell death | GO:0009751--response to salicylic acid | 2 | 0.0612 -- 0.0335 |
| GO:0012501--programmed cell death | GO:0004672--protein kinase activity | 2 | 0.0612 -- 0.0317 |
| GO:0012501--programmed cell death | GO:0005886--plasma membrane | 2 | 0.0612 -- 0.0315 |
| GO:0012501--programmed cell death | GO:0005773--vacuole | 0 | 0.0612 -- 0.0311 |
| GO:0009751--response to salicylic acid | GO:0004672--protein kinase activity | 3 | 0.0335 -- 0.0317 |
| GO:0009751--response to salicylic acid | GO:0005886--plasma membrane | 6 | 0.0335 -- 0.0315 |
| GO:0009751--response to salicylic acid | GO:0005773--vacuole | 1 | 0.0335 -- 0.0311 |
| GO:0004672--protein kinase activity | GO:0005886--plasma membrane | 22 | 0.0317 -- 0.0315 |
| GO:0004672--protein kinase activity | GO:0005773--vacuole | 1 | 0.0317 -- 0.0311 |
| GO:0005886--plasma membrane | GO:0005773--vacuole | 8 | 0.0315 -- 0.0311 |